Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0842KEGG: ava:Ava_1124 hypothetical protein. (498 aa)    
Predicted Functional Partners:
Bind_0840
PFAM: glycosyl transferase group 1; KEGG: bmu:Bmul_4910 glycosyl transferase group 1.
 
     0.942
Bind_0841
PFAM: glycosyl transferase group 1; KEGG: amr:AM1_1894 glycosyl transferase, group 1 family protein.
 
     0.939
Bind_0838
PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A2618 glycosyl transferase, group 2 family protein.
 
     0.907
Bind_0839
PFAM: glycosyl transferase group 1; KEGG: hau:Haur_4807 phosphatidylinositol alpha-mannosyltransferase.
 
     0.857
Bind_0837
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
 
   
 0.762
Bind_0844
PFAM: glycosyl transferase family 2; KEGG: reh:H16_B0041 predicted glycosyltransferase.
 
     0.759
Bind_3640
PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6161 cytochrome c, class I.
  
     0.754
Bind_0806
PFAM: lipopolysaccharide biosynthesis protein; KEGG: azc:AZC_2186 putative ATPase.
 
   
 0.746
Bind_0502
KEGG: rca:Rcas_3511 hypothetical protein.
  
     0.737
Bind_0782
PFAM: Phytanoyl-CoA dioxygenase; KEGG: pmt:PMT1382 hypothetical protein.
  
     0.737
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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