STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0843Hypothetical protein; KEGG: det:DET0108 endonuclease/exonuclease/phosphatase family protein. (411 aa)    
Predicted Functional Partners:
Bind_0839
PFAM: glycosyl transferase group 1; KEGG: hau:Haur_4807 phosphatidylinositol alpha-mannosyltransferase.
       0.689
Bind_0840
PFAM: glycosyl transferase group 1; KEGG: bmu:Bmul_4910 glycosyl transferase group 1.
       0.689
Bind_0841
PFAM: glycosyl transferase group 1; KEGG: amr:AM1_1894 glycosyl transferase, group 1 family protein.
       0.689
Bind_0842
KEGG: ava:Ava_1124 hypothetical protein.
       0.689
Bind_0837
PFAM: lipopolysaccharide biosynthesis protein; KEGG: pla:Plav_1906 non-specific protein-tyrosine kinase.
       0.573
Bind_0838
PFAM: glycosyl transferase family 2; KEGG: bpd:BURPS668_A2618 glycosyl transferase, group 2 family protein.
       0.573
Bind_0844
PFAM: glycosyl transferase family 2; KEGG: reh:H16_B0041 predicted glycosyltransferase.
       0.481
Bind_0836
PFAM: glycosyl transferase group 1; KEGG: bra:BRADO7078 putative glycosyl transferase, group 1 family protein.
       0.406
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.