Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_0885PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: xau:Xaut_4413 protein of unknown function DUF900 hydrolase family protein. (418 aa)    
Predicted Functional Partners:
Bind_0513
PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150.
  
     0.686
Bind_2407
KEGG: azc:AZC_1593 hypothetical protein.
  
     0.604
Bind_2033
Multi-sensor signal transduction histidine kinase; KEGG: azc:AZC_3122 PAS protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.586
Bind_0324
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xau:Xaut_3409 ErfK/YbiS/YcfS/YnhG family protein.
  
     0.562
Bind_1307
PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 protein of unknown function DUF540.
  
     0.557
Bind_3362
PFAM: protein of unknown function DUF423; KEGG: mlo:mll8379 hypothetical protein.
  
     0.554
Bind_0057
PFAM: protein of unknown function DUF992; KEGG: azc:AZC_3134 hypothetical protein.
  
     0.541
Bind_0363
PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2864 protein of unknown function DUF214.
  
     0.518
Bind_1574
PFAM: MltA-interacting MipA family protein; KEGG: xau:Xaut_1031 MltA-interacting MipA family protein.
  
     0.510
Bind_0108
Porin; PFAM: OmpA domain protein transmembrane region-containing protein; porin; KEGG: azc:AZC_3727 outer membrane protein Omp31 precursor.
  
     0.506
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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