STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_0902TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1543 acriflavin resistance periplasmic protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (473 aa)    
Predicted Functional Partners:
Bind_0901
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: gbe:GbCGDNIH1_1542 acriflavin resistance plasma membrane protein.
   0.915
Bind_2449
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
   0.828
Bind_3092
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1.
   0.827
Bind_2921
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bja:blr4455 putative outer-membrane immunogenic protein precursor.
 
 
 0.721
Bind_2024
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3796 putative outer membrane protein.
 
 
 0.715
Bind_2924
PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2560 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.685
Bind_2502
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI0997 putative outer membrane protein OprJ.
 
 
 0.684
Bind_2923
PFAM: acriflavin resistance protein; KEGG: rpc:RPC_2559 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.679
Bind_1168
PFAM: acriflavin resistance protein; KEGG: xau:Xaut_1597 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.668
Bind_0903
Hypothetical protein.
       0.628
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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