Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0912PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_0630 major facilitator superfamily MFS_1. (405 aa)    
Predicted Functional Partners:
Bind_0913
PFAM: aldo/keto reductase; KEGG: gdi:GDI1640 oxidoreductase.
       0.779
Bind_0914
PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2.
 
     0.539
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.524
Bind_1706
PFAM: major facilitator superfamily MFS_1; KEGG: bte:BTH_I1400 major facilitator family transporter.
  
     0.477
Bind_2009
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_2308 major facilitator superfamily MFS_1.
  
     0.470
Bind_2302
PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3069 putative transporter transmembrane protein.
  
     0.446
Bind_2119
PFAM: major facilitator superfamily MFS_1; KEGG: mpt:Mpe_A0872 putative transport transmembrane protein.
  
     0.402
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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