Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0920Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: dsh:Dshi_2852 transcriptional regulator, LuxR family. (268 aa)    
Predicted Functional Partners:
Bind_0919
PFAM: autoinducer synthesis protein; KEGG: bbt:BBta_5196 autoinducer synthesis protein.
 
  
 0.926
Bind_2974
PFAM: autoinducer synthesis protein; KEGG: sal:Sala_2589 autoinducer synthesis protein.
 
  
 0.799
Bind_2976
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: swi:Swit_5012 regulatory protein, LuxR.
 
 
 
 0.728
Bind_2973
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: sal:Sala_2525 transcriptional regulator, LuxR family.
  
     0.590
Bind_0918
Hypothetical protein.
       0.561
Bind_0847
PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2581 condensation domain.
  
   
 0.477
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
   
 0.463
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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