Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_0955PFAM: regulatory protein ArsR; KEGG: bja:bll5291 transcriptional regulatory protein. (113 aa)    
Predicted Functional Partners:
Bind_2942
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bam:Bamb_5221 transcriptional regulator, AraC family.
  
    0.633
Bind_3002
PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein.
  
  
 0.610
Bind_2139
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_0618 protein tyrosine phosphatase.
  
  
 0.451
Bind_2280
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein.
 
  
 0.450
Bind_2679
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase.
  
  
 0.428
Bind_1384
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein.
 
  
 0.409
Bind_0953
PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein.
     
 0.403
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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