Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1029PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 putative integral membrane prenyltransferase protein; Belongs to the UbiA prenyltransferase family. (485 aa)    
Predicted Functional Partners:
Bind_1027
PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_7179 hypothetical protein.
 
  
 0.971
Bind_1028
KEGG: ret:RHE_CH03426 hypothetical protein.
 
     0.956
Bind_1026
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03424 short chain dehydrogenase.
 
  
 0.878
hisF
Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
  
 0.861
hisI
Phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
  
  
 0.747
Bind_1403
KEGG: bbt:BBta_7186 putative membrane protein of unknown function.
 
  
 0.741
Bind_1404
KEGG: bbt:BBta_7186 putative membrane protein of unknown function.
 
  
 0.741
hisB
PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: bbt:BBta_0148 imidazoleglycerol-phosphate dehydratase.
  
  
 0.700
Bind_1775
PFAM: tRNA synthetase class II (G H P and S); KEGG: bja:blr7524 ATP phosphoribosyltransferase regulatory subunit.
  
    0.699
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
  
  
 0.688
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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