Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_1090PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_3870 ABC transporter related. (261 aa)    
Predicted Functional Partners:
Bind_1091
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nwi:Nwi_0333 binding-protein-dependent transport systems inner membrane component.
 
 0.978
Bind_1089
PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_7482 putative ABC transporter, periplasmic binding protein.
 
 
 0.959
Bind_2552
KEGG: sme:SMa2081 probable ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.851
Bind_0551
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3168 sulfate ester transporter permease component.
 
 
 0.727
Bind_0552
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_3169 sulfate ester transport system permease protein.
 
 
 0.725
Bind_0676
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_3459 binding-protein-dependent transport systems inner membrane component.
 
 
 0.725
Bind_2058
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component.
 
 
 0.671
Bind_1967
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component-like protein; KEGG: cyb:CYB_0037 nitrate ABC transporter, ATP-binding protein NtrC.
 
 
 0.654
Bind_2437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpe:RPE_3194 binding-protein-dependent transport systems inner membrane component.
 
 
 0.638
Bind_1092
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: azc:AZC_4207 putative glycerate dehydrogenase.
 
     0.547
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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