Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Bind_1173KEGG: mex:Mext_4307 hypothetical protein. (177 aa)    
Predicted Functional Partners:
Bind_0513
PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150.
  
     0.758
Bind_1070
KEGG: rpd:RPD_0792 hypothetical protein.
  
     0.758
Bind_3592
KEGG: mex:Mext_4396 hypothetical protein.
  
     0.739
Bind_2033
Multi-sensor signal transduction histidine kinase; KEGG: azc:AZC_3122 PAS protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.721
Bind_3362
PFAM: protein of unknown function DUF423; KEGG: mlo:mll8379 hypothetical protein.
  
     0.699
Bind_0872
PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: rpe:RPE_2325 transglutaminase family protein cysteine peptidase, BTLCP.
  
     0.688
Bind_0443
PFAM: protein of unknown function DUF465; KEGG: xau:Xaut_2598 protein of unknown function DUF465.
  
     0.686
Bind_1632
PFAM: protein of unknown function DUF1214; KEGG: nha:Nham_1402 protein of unknown function DUF1214.
  
     0.686
Bind_2373
KEGG: nwi:Nwi_0593 hypothetical protein.
  
     0.680
Bind_1635
KEGG: mex:Mext_4416 hypothetical protein.
  
     0.656
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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