Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1188Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: azc:AZC_3736 citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (292 aa)    
Predicted Functional Partners:
Bind_0861
Citrate lyase beta subunit-like protein; KEGG: mes:Meso_1012 HpcH/HpaI aldolase.
     
  0.900
Bind_2533
PFAM: MaoC domain protein dehydratase; KEGG: ypi:YpsIP31758_2157 MaoC domain protein.
 
  
 0.738
Bind_2534
Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: yps:YPTB1926 putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.628
Bind_1187
Carbonate dehydratase; PFAM: carbonic anhydrase; KEGG: azc:AZC_2766 carbonic anhydrase.
       0.549
Bind_1036
PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase.
   
    0.543
Bind_2082
PFAM: class II aldolase/adducin family protein; KEGG: xau:Xaut_1030 class II aldolase/adducin family protein.
   
    0.543
Bind_2693
PFAM: class II aldolase/adducin family protein; KEGG: bra:BRADO4286 hypothetical protein.
   
    0.543
Bind_2199
KEGG: mex:Mext_4794 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein.
     
 0.490
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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