Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Bind_1272PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561. (190 aa)    
Predicted Functional Partners:
Bind_1271
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
     0.924
Bind_1935
PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein; Belongs to the UPF0312 family.
  
 0.767
argG
PFAM: argininosuccinate synthase; KEGG: mex:Mext_2293 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
     0.576
Bind_3566
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
 
     0.407
Bind_1270
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.406
Bind_1933
PFAM: YceI family protein; KEGG: gdi:GDI1483 hypothetical protein; Belongs to the UPF0312 family.
 
  
 0.403
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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