Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1314PFAM: ATP12 ATPase; KEGG: rpb:RPB_2337 ATP12 ATPase. (273 aa)    
Predicted Functional Partners:
Bind_1312
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
     0.786
Bind_1315
PFAM: glutathione peroxidase; KEGG: spe:Spro_2152 glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.755
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.736
Bind_1313
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.736
Bind_1316
PFAM: GCN5-related N-acetyltransferase; KEGG: oan:Oant_2212 GCN5-related N-acetyltransferase.
       0.721
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 
 0.690
atpA-2
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
 
 0.690
Bind_0469
PFAM: Rhodanese domain protein; Ankyrin; KEGG: xau:Xaut_0147 rhodanese domain protein.
    
   0.649
Bind_1952
PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: nwi:Nwi_1760 NADH-ubiquinone oxidoreductase.
  
   
 0.619
Bind_1317
PFAM: carboxyl transferase; KEGG: ret:RHE_CH02232 propionyl-CoA carboxylase beta chain protein.
       0.581
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.