Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_1319Levanase; KEGG: afm:AFUA_5G00480 exoinulinase InuD; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; Belongs to the glycosyl hydrolase 32 family. (705 aa)    
Predicted Functional Partners:
Bind_2021
Levansucrase; PFAM: glycoside hydrolase family 68; KEGG: bch:Bcen2424_4270 levansucrase; Belongs to the glycosyl hydrolase 68 family.
 
  
 0.947
Bind_2031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_2607 TonB-dependent siderophore receptor, putative.
  
 
   0.563
Bind_3305
TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA4387 possible ferrichrome-iron receptor.
    
   0.506
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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