Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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[Homology]
Score
Bind_1403KEGG: bbt:BBta_7186 putative membrane protein of unknown function. (505 aa)    
Predicted Functional Partners:
Bind_1029
PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 putative integral membrane prenyltransferase protein; Belongs to the UbiA prenyltransferase family.
 
  
 0.741
Bind_1401
KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region.
       0.538
Bind_1402
TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rpc:RPC_2496 exodeoxyribonuclease III (xth).
       0.538
Bind_1404
KEGG: bbt:BBta_7186 putative membrane protein of unknown function.
 
    
0.526
Bind_1027
PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_7179 hypothetical protein.
  
     0.482
Bind_1026
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_CH03424 short chain dehydrogenase.
  
     0.440
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
  
 0.410
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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