Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1415PFAM: transcriptional regulator PadR family protein; KEGG: gdi:GDI0892 putative transcriptional regulator, PadR-like family. (209 aa)    
Predicted Functional Partners:
Bind_2120
PFAM: protein of unknown function DUF336; KEGG: gox:GOX0922 hypothetical protein.
  
     0.524
Bind_1414
PFAM: Phosphoglycerate mutase; KEGG: ret:RHE_PF00323 putative phosphoglycerate mutase protein; Belongs to the phosphoglycerate mutase family.
       0.507
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: bmt:BSUIS_A1189 indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
       0.459
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.451
Bind_1418
Molybdenum cofactor synthesis domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.451
Bind_2500
PFAM: major facilitator superfamily MFS_1; KEGG: gox:GOX2104 putative transport protein.
  
     0.422
Bind_1413
PFAM: glutamine amidotransferase class-I; KEGG: rru:Rru_A3512 glutamine amidotransferase.
       0.416
Bind_1305
KEGG: gdi:GDI0324 hypothetical protein.
 
  
 0.413
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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