Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1492Hypothetical protein; KEGG: aor:AO090023000157 predicted protein Pfam: SGL. (224 aa)    
Predicted Functional Partners:
Bind_1493
Conserved hypothetical protein; KEGG: ana:all0351 unknown protein.
      0.935
Bind_1494
PFAM: Carboxymuconolactone decarboxylase; KEGG: mva:Mvan_0928 carboxymuconolactone decarboxylase.
 
     0.722
Bind_1855
KEGG: bvi:Bcep1808_6885 hypothetical protein.
  
     0.699
Bind_0276
PFAM: alpha/beta hydrolase fold; KEGG: bam:Bamb_6110 alpha/beta hydrolase fold.
  
     0.446
Bind_3566
Catalase domain protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
     0.443
Bind_2615
PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: bxe:Bxe_A1772 putative esterase.
  
     0.402
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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