Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1496PFAM: protein of unknown function DUF1044; KEGG: mex:Mext_1502 protein of unknown function DUF1044. (89 aa)    
Predicted Functional Partners:
Bind_1497
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1503 putative DNA-binding protein.
 
  
 0.957
Bind_2076
KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
  
     0.673
Bind_1498
KEGG: noc:Noc_1294 hypothetical protein.
       0.639
Bind_0592
KEGG: ana:alr0587 unknown protein.
  
     0.493
Bind_0590
PFAM: glycosyl transferase group 1; KEGG: mpt:Mpe_A0734 glycosyltransferase-like protein.
  
     0.443
Bind_2143
PFAM: phosphoesterase PA-phosphatase related; KEGG: mlo:mll2704 probable acid phosphatase.
  
     0.414
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.