Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1515PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ava:Ava_3671 haloacid dehalogenase-like hydrolase. (242 aa)    
Predicted Functional Partners:
Bind_1514
PFAM: CinA domain protein; KEGG: mmr:Mmar10_1438 CinA domain protein; Belongs to the CinA family.
       0.779
ispDF
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).
  
   0.697
Bind_2770
KEGG: lmo:lmo1968 hypothetical protein.
  
     0.537
Bind_1845
PFAM: Cephalosporin hydroxylase; KEGG: syw:SYNW0087 hypothetical protein.
  
     0.516
Bind_1513
PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_0831 hypothetical protein.
       0.505
Bind_2724
KEGG: ngo:NGO0510 hypothetical protein, putative phage associated protein.
  
     0.505
Bind_1189
KEGG: rpd:RPD_0468 hypothetical protein.
  
     0.486
Bind_2727
KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein.
  
     0.470
Bind_2216
KEGG: nar:Saro_3404 hypothetical protein.
  
     0.465
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.462
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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