Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Bind_1663 | Bind_1664 | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase. | 0.406 |
Bind_1663 | Bind_3014 | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. | 0.906 |
Bind_1663 | Bind_3031 | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin). | 0.424 |
Bind_1664 | Bind_1663 | PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase. | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | 0.406 |
Bind_3014 | Bind_1663 | KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | 0.906 |
Bind_3014 | Bind_3031 | KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. | PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin). | 0.600 |
Bind_3031 | Bind_1663 | PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin). | PFAM: amino acid permease-associated region; KEGG: rpc:RPC_1838 amino acid permease-associated region. | 0.424 |
Bind_3031 | Bind_3014 | PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin). | KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. | 0.600 |