Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Bind_1666PFAM: histidine triad (HIT) protein; KEGG: xau:Xaut_3536 histidine triad (HIT) protein. (142 aa)    
Predicted Functional Partners:
Bind_1216
TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: bja:blr4949 glutamine synthetase I.
   
   0.782
Bind_1665
PFAM: protein of unknown function DUF482; KEGG: azc:AZC_2321 hypothetical protein.
       0.696
Bind_1566
KEGG: bbt:BBta_0026 uridine kinase.
   
  0.592
Bind_1553
PFAM: Silent information regulator protein Sir2; KEGG: azc:AZC_1935 silent information regulator protein.
    
  0.527
Bind_0946
PFAM: histone deacetylase superfamily; KEGG: xau:Xaut_1155 histone deacetylase superfamily.
   
  0.494
Bind_3233
PFAM: protein of unknown function DUF1036; KEGG: azc:AZC_0444 hypothetical protein.
  
     0.489
hisS
Histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: xau:Xaut_1216 histidyl-tRNA synthetase.
 
 
   0.468
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.448
Bind_2731
PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 protein of unknown function DUF343; Belongs to the UPF0434 family.
  
    0.433
Bind_1664
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nha:Nham_0613 amine oxidase.
  
    0.421
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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