STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psdPhosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (232 aa)    
Predicted Functional Partners:
Bind_1678
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.992
Bind_3036
Phosphatidylethanolamine N-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: nha:Nham_0696 phosphatidylethanolamine N-methyltransferase.
 
  
 0.926
Bind_0130
SMART: ribosomal RNA adenine methylase transferase; KEGG: azc:AZC_0161 phospholipid N-methyltransferase.
    
 0.914
Bind_1837
KEGG: bte:BTH_I1762 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
Bind_3104
KEGG: bur:Bcep18194_B0123 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
Bind_3617
Phospholipase C, phosphocholine-specific; KEGG: rfr:Rfer_3735 twin-arginine translocation pathway signal; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756.
     
  0.900
Bind_0298
PFAM: phosphatidate cytidylyltransferase; KEGG: azc:AZC_1698 phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.446
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.445
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.434
Bind_1894
PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; KEGG: ppr:PBPRB0014 hypothetical acyltransferase family protein.
     
 0.425
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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