Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1725TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer membrane protein, TolC family. (489 aa)    
Predicted Functional Partners:
Bind_0124
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mca:MCA0176 outer membrane efflux protein.
  
  
 0.918
Bind_2921
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bja:blr4455 putative outer-membrane immunogenic protein precursor.
  
  
0.912
Bind_0193
Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
     
0.903
Bind_3231
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rpe:RPE_2748 type I secretion outer membrane protein, TolC family.
  
  
 
0.901
Bind_2450
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:bll5081 putative multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.889
Bind_3091
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr7329 putative multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.886
Bind_0123
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: gdi:GDI3850 secretion protein, HlyD-family; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.881
Bind_3092
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_0993 hydrophobe/amphiphile efflux-1 HAE1.
 
 0.878
Bind_2449
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4353 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family.
 
 0.877
Bind_2877
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.874
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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