STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1727Hypothetical protein. (108 aa)    
Predicted Functional Partners:
Bind_1728
PFAM: GCN5-related N-acetyltransferase; KEGG: bja:bll6511 acetyltransferase.
       0.783
Bind_1729
PFAM: dihydrofolate reductase region; KEGG: xau:Xaut_1420 dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
       0.545
Bind_1730
HflK protein; HflC and HflK could encode or regulate a protease.
       0.404
Bind_1731
HflC protein; HflC and HflK could regulate a protease.
       0.404
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.