Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1863PFAM: Sel1 domain protein repeat-containing protein; KEGG: azc:AZC_2814 putative exopolysaccharide regulatory protein. (342 aa)    
Predicted Functional Partners:
Bind_3521
PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain protein repeat-containing protein.
  
     0.771
Bind_1095
PFAM: Sel1 domain protein repeat-containing protein; KEGG: rpa:RPA0814 hypothetical protein.
  
     0.752
Bind_1816
KEGG: mex:Mext_2318 hypothetical protein.
  
     0.717
Bind_0268
KEGG: nwi:Nwi_0527 hypothetical protein.
  
     0.701
Bind_3592
KEGG: mex:Mext_4396 hypothetical protein.
  
     0.698
Bind_2348
KEGG: rpa:RPA3958 hypothetical protein.
 
 
   0.693
Bind_0715
PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein.
  
     0.686
Bind_2740
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: azc:AZC_4066 histidine kinase.
  
 
 
 0.682
Bind_0731
PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein.
  
     0.678
Bind_2193
PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein.
  
     0.676
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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