Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1914PFAM: GCN5-related N-acetyltransferase; KEGG: rpc:RPC_2088 GCN5-related N-acetyltransferase. (167 aa)    
Predicted Functional Partners:
cysS
KEGG: azc:AZC_1784 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.830
Bind_1913
TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: bbt:BBta_3501 putative alpha-isopropylmalate/homocitrate synthase family transferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.784
Bind_3021
PFAM: transcription activator effector binding; KEGG: bra:BRADO0382 conserved hypothetical protein; putative secreted protein.
  
     0.511
Bind_3675
KEGG: xau:Xaut_4721 hypothetical protein.
 
     0.507
Bind_3214
KEGG: rpb:RPB_3326 hypothetical protein.
  
     0.503
Bind_3147
PFAM: GCN5-related N-acetyltransferase; KEGG: xau:Xaut_0845 GCN5-related N-acetyltransferase.
  
     0.492
Bind_1916
KEGG: rpb:RPB_4438 SpoVT/AbrB-like.
       0.458
Bind_1107
KEGG: mex:Mext_4294 hypothetical protein.
  
     0.415
Bind_0671
PFAM: NUDIX hydrolase; KEGG: bbt:BBta_6065 hypothetical protein.
  
     0.411
Bind_1482
PFAM: Protein of unknown function DUF1778; KEGG: rpa:RPA3583 hypothetical protein.
   
 
 0.405
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.