Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1938PFAM: Acetoacetate decarboxylase; KEGG: tet:TTHERM_00035180 acetoacetate decarboxylase. (245 aa)    
Predicted Functional Partners:
Bind_1142
KEGG: rpa:RPA4156 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.
    
 0.909
Bind_3273
KEGG: rru:Rru_A1383 acetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase.
    
 0.909
Bind_1141
KEGG: nha:Nham_1247 3-oxoacid CoA-transferase, subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
    
 0.905
Bind_3274
3-oxoacid CoA-transferase, B subunit; KEGG: rru:Rru_A1382 butyrate-acetoacetate CoA-transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase.
    
 0.905
adc
Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
  
  
 
0.904
Bind_2696
TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_1887 3-hydroxybutyrate dehydrogenase.
     
  0.900
Bind_3009
TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_6971 D-beta-hydroxybutyrate dehydrogenase.
     
  0.900
Bind_3657
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nha:Nham_1928 alcohol dehydrogenase, zinc-binding.
     
  0.900
Bind_1856
PFAM: Patatin; KEGG: bja:blr2776 putative patatin-like phospholipase.
 
   
 0.722
Bind_1937
PFAM: Pirin domain protein; KEGG: gdi:GDI0848 hypothetical protein; Belongs to the pirin family.
       0.510
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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