Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_1942PFAM: regulatory protein ArsR; KEGG: bov:BOV_A0396 transcriptional regulator, ArsR family. (129 aa)    
Predicted Functional Partners:
Bind_1941
PFAM: beta-lactamase domain protein; KEGG: sme:SMc00276 hypothetical protein.
 
   
 0.837
Bind_1943
PFAM: protein of unknown function DUF81; KEGG: oan:Oant_4660 protein of unknown function DUF81.
 
     0.742
Bind_1940
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
       0.739
Bind_1939
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gdi:GDI1147 pyridine nucleotide-disulphide oxidoreductase.
       0.548
Bind_2679
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: spe:Spro_2413 heavy metal translocating P-type ATPase.
  
  
 0.428
Bind_3010
KEGG: nha:Nham_0618 putative ferric uptake regulator, FUR family; Belongs to the Fur family.
  
  
 0.416
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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