STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1992PFAM: regulatory protein LuxR; KEGG: bur:Bcep18194_B1619 transcriptional regulator, LuxR family. (377 aa)    
Predicted Functional Partners:
Bind_2513
KEGG: mpt:Mpe_A0156 hypothetical protein.
  
     0.651
Bind_2073
PFAM: TonB-dependent receptor plug; KEGG: sat:SYN_01058 TonB dependent receptor family.
  
     0.634
Bind_0864
KEGG: bur:Bcep18194_C6733 hypothetical protein.
  
     0.595
Bind_1845
PFAM: Cephalosporin hydroxylase; KEGG: syw:SYNW0087 hypothetical protein.
  
     0.567
Bind_1398
Putative phage repressor; PFAM: helix-turn-helix domain protein; peptidase S24 and S26 domain protein; KEGG: mes:Meso_1193 putative phage repressor.
  
     0.559
Bind_0842
KEGG: ava:Ava_1124 hypothetical protein.
  
     0.538
Bind_0782
PFAM: Phytanoyl-CoA dioxygenase; KEGG: pmt:PMT1382 hypothetical protein.
  
     0.534
Bind_2770
KEGG: lmo:lmo1968 hypothetical protein.
  
     0.524
Bind_2724
KEGG: ngo:NGO0510 hypothetical protein, putative phage associated protein.
  
     0.519
Bind_2727
KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein.
  
     0.518
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.