Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_1994PFAM: OsmC family protein; KEGG: cak:Caul_5086 OsmC family protein. (143 aa)    
Predicted Functional Partners:
Bind_1337
PFAM: GAF domain protein; HWE histidine kinase; KEGG: mex:Mext_3300 PAS sensor protein.
  
    0.616
Bind_0140
PFAM: Ferritin Dps family protein; KEGG: gdi:GDI0826 ferritin-like protein; Belongs to the Dps family.
  
  
 0.604
Bind_3237
KEGG: bja:bll1466 hypothetical protein.
   
  
 0.553
Bind_2623
PFAM: ThiJ/PfpI domain protein; KEGG: vvy:VV0154 hypothetical protein.
 
  
 0.509
Bind_3013
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: glycosyl transferase family 20; KEGG: rle:RL0503 putative trehalose-6-phosphate synthase,glycosyltransferase.
   
    0.460
Bind_0500
KEGG: gvi:gll2512 hypothetical protein.
  
    0.446
Bind_1561
PFAM: superoxide dismutase copper/zinc binding; KEGG: cak:Caul_2872 superoxide dismutase copper/zinc binding.
  
  
 0.403
Bind_1972
PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: gdi:GDI0493 putative flavohemoprotein; Belongs to the globin family.
     
 0.403
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.