Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2004KEGG: gdi:GDI2313 putative ABC-type Fe3+ transport system periplasmic component. (354 aa)    
Predicted Functional Partners:
Bind_2006
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gdi:GDI2311 putative ABC-type Fe3+ transport system ATP-binding component.
 
 
 0.977
Bind_2005
PFAM: transport system permease protein; KEGG: gdi:GDI2312 putative ABC-type Fe3+ transport system permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.971
Bind_2328
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_0955 ABC transporter related.
 
 
 0.908
Bind_2329
PFAM: transport system permease protein; KEGG: nha:Nham_0954 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.881
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.648
Bind_1183
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor.
 
  
 0.523
Bind_0847
PFAM: Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mes:Meso_2581 condensation domain.
  
  
 0.521
Bind_0366
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gox:GOX2077 ferric siderophore receptor.
 
  
 0.487
Bind_1903
PFAM: TOBE domain protein; KEGG: rpa:RPA4719 molybdo-pterin binding protein.
 
     0.474
Bind_1732
KEGG: gdi:GDI3686 hypothetical protein.
  
     0.472
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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