Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2016PFAM: FAD linked oxidase domain protein; KEGG: rpd:RPD_1246 FAD linked oxidase-like. (474 aa)    
Predicted Functional Partners:
Bind_0072
KEGG: xau:Xaut_2720 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
  
 0.913
Bind_2015
PFAM: polysaccharide biosynthesis protein; KEGG: ppr:PBPRA2684 hypothetical protein.
       0.682
Bind_2622
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase.
 
 0.502
Bind_3272
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: oan:Oant_1012 electron transfer flavoprotein alpha subunit.
 
   0.465
Bind_1751
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: mag:amb3229 electron transfer flavoprotein.
 
   0.459
Bind_1029
PFAM: UbiA prenyltransferase; KEGG: ret:RHE_CH03427 putative integral membrane prenyltransferase protein; Belongs to the UbiA prenyltransferase family.
    
 0.440
Bind_1752
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dar:Daro_1211 electron transfer flavoprotein beta-subunit.
 
 
 0.440
Bind_3271
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sal:Sala_0178 electron transfer flavoprotein beta-subunit.
 
 
 0.440
Bind_3031
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xau:Xaut_0477 glutamate synthase (ferredoxin).
     
 0.436
Bind_0487
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mlo:mll5862 nitrogen fixation protein,FixA.
 
 
 0.426
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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