Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2020Levanase; KEGG: bte:BTH_II1873 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; Belongs to the glycosyl hydrolase 32 family. (546 aa)    
Predicted Functional Partners:
Bind_2866
PFAM: PfkB domain protein; KEGG: xau:Xaut_2416 PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.
 
 
 0.922
Bind_2459
PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: atc:AGR_L_830 mannitol 2-dehydrogenase (MDH).
     
 0.910
Bind_2021
Levansucrase; PFAM: glycoside hydrolase family 68; KEGG: bch:Bcen2424_4270 levansucrase; Belongs to the glycosyl hydrolase 68 family.
 
   
 0.721
Bind_2031
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pst:PSPTO_2607 TonB-dependent siderophore receptor, putative.
  
 
   0.566
Bind_3305
TIGRFAM: outer membrane insertion C-terminal signal; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA4387 possible ferrichrome-iron receptor.
    
   0.506
Bind_2019
KEGG: bxe:Bxe_C0750 Mn2+/Fe2+ transporter, NRAMP family.
       0.422
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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