Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2034Transcriptional regulator, ModE family; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: rpd:RPD_2476 ModE molybdate transport repressor domain. (267 aa)    
Predicted Functional Partners:
modC
Molybdate ABC transporter, ATPase subunit; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.
 
 
 
 0.644
Bind_2970
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpa:RPA0153 possible outer membrane receptor for Fe transport.
  
   
 0.633
Bind_0281
Putative transcriptional regulator, ModE family; PFAM: regulatory protein LysR; KEGG: bra:BRADO1762 putative transcriptional regulatory protein, LysR family; putative molybdenum transport regulator, ModE.
 
 
   0.604
Bind_2283
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
 0.476
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
 
  
 0.468
Bind_0860
KEGG: nwi:Nwi_0880 hypothetical protein.
 
   
 0.465
Bind_3066
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: rpe:RPE_0764 molybdenum ABC transporter, periplasmic molybdate-binding protein.
 
   
 0.452
Bind_2035
Hypothetical protein.
       0.445
rpsM
Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
       0.445
Bind_0482
PFAM: NifQ family protein; KEGG: rpd:RPD_1082 NifQ.
 
   
 0.423
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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