Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2072PFAM: protein of unknown function DUF1674; KEGG: xau:Xaut_1806 protein of unknown function DUF1674. (75 aa)    
Predicted Functional Partners:
hisS
Histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: xau:Xaut_1216 histidyl-tRNA synthetase.
  
     0.755
Bind_1037
PFAM: 2-deoxycytidine 5-triphosphate deaminase; KEGG: rpd:RPD_0904 2'-deoxycytidine 5'-triphosphate deaminase.
  
     0.741
Bind_0827
KEGG: bja:bll0464 hypothetical protein.
  
     0.681
Bind_1656
PFAM: protein of unknown function DUF1491; KEGG: rpe:RPE_1874 protein of unknown function DUF1491.
  
     0.638
Bind_2071
TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: xau:Xaut_0038 sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.627
Bind_3667
PFAM: GcrA cell cycle regulator; KEGG: xau:Xaut_1217 GcrA cell cycle regulator.
  
     0.607
Bind_2728
KEGG: rsq:Rsph17025_3714 hypothetical protein.
  
     0.590
Bind_2070
PFAM: Heparinase II/III family protein; KEGG: xau:Xaut_0039 heparinase II/III family protein.
 
     0.578
Bind_3483
PFAM: protein of unknown function DUF1223; KEGG: bbt:BBta_0383 putative exported protein of unknown function.
  
     0.557
Bind_3530
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: azc:AZC_4070 periplasmic sensor signal transduction histidine kinase.
  
     0.554
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.