Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2114PFAM: protein of unknown function DUF214; KEGG: mca:MCA1808 ABC-transporter permease protein, putative. (380 aa)    
Predicted Functional Partners:
Bind_2113
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eli:ELI_11040 ABC transporter, ATP-binding protein.
 
 
 0.985
Bind_2112
PFAM: secretion protein HlyD family protein; KEGG: mca:MCA1810 hypothetical protein.
 
   
 0.955
lolD
ABC transporter related; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
 0.854
Bind_0445
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.744
Bind_2111
KEGG: psb:Psyr_3318 hypothetical protein.
 
     0.585
Bind_3266
KEGG: gsu:GSU2811 cytochrome c Hsc.
  
     0.561
Bind_2115
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR.
       0.528
Bind_2116
PFAM: Pirin domain protein; KEGG: cak:Caul_0818 pirin domain protein; Belongs to the pirin family.
       0.447
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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