Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2139PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rpc:RPC_0618 protein tyrosine phosphatase. (179 aa)    
Predicted Functional Partners:
Bind_2140
SMART: regulatory protein ArsR; KEGG: rpc:RPC_0619 putative transcriptional regulator, ArsR family.
  
 0.963
Bind_2137
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: oan:Oant_3198 arsenical-resistance protein.
 
  
 0.848
Bind_2138
PFAM: arsenate reductase and related; KEGG: smd:Smed_5055 arsenate reductase; Belongs to the ArsC family.
 
  
 0.839
Bind_2136
TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: swi:Swit_2241 arsenate resistance ArsH.
 
  
 0.808
Bind_0666
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: bra:BRADO6635 putative arsenate reductase (ArsC-like).
  
     0.709
Bind_2141
KEGG: rpc:RPC_2461 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein.
 
     0.565
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.504
Bind_0955
PFAM: regulatory protein ArsR; KEGG: bja:bll5291 transcriptional regulatory protein.
  
  
 0.451
pyrF
Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.
 
      0.439
Bind_1278
Transcriptional regulator, ArsR family; PFAM: Rhodanese domain protein; regulatory protein ArsR; KEGG: bps:BPSS2118 ArsR family transcriptional regulator.
 
 
 0.412
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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