Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2190KEGG: mex:Mext_0989 OpgC protein. (380 aa)    
Predicted Functional Partners:
Bind_2189
PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_0988 hypothetical protein.
 
     0.923
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
       0.585
Bind_2076
KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein.
  
     0.455
Bind_1791
PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849.
  
     0.449
Bind_2193
PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein.
  
     0.446
Bind_3430
KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family.
  
     0.435
Bind_1817
KEGG: cph:Cpha266_2437 hypothetical protein.
  
     0.426
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.