Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2210PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI0681 putative glucarate transporter. (455 aa)    
Predicted Functional Partners:
Bind_2209
Hydroxypyruvate reductase; PFAM: MOFRL domain protein; KEGG: gbe:GbCGDNIH1_0364 glycerate dehydrogenase.
       0.775
Bind_2576
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A1718 major facilitator superfamily (MFS) transporter.
  
     0.622
Bind_2208
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: gdi:GDI0682 putative transcriptional regulator, GntR family.
 
     0.606
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.493
Bind_2211
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: gdi:GDI0680 putative acyl-CoA transferase; Belongs to the CoA-transferase III family.
       0.479
Bind_2212
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: gdi:GDI0679 putative 3-hydroxybutyryl-CoA dehydratase.
       0.475
Bind_0105
KEGG: gdi:GDI0016 putative sugar transporter protein; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
   
 0.456
Bind_2486
KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
     0.408
Bind_2375
KEGG: gdi:GDI1241 putative sugar-proton symporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
     0.407
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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