Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2221KEGG: mlo:mll6593 hypothetical protein. (520 aa)    
Predicted Functional Partners:
Bind_1976
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.924
Bind_0958
PFAM: phosphoribosyltransferase; KEGG: mes:Meso_3530 phosphoribosyltransferase.
 
  
 0.779
Bind_0935
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cak:Caul_3346 HAD-superfamily hydrolase, subfamily IA, variant 3.
  
    0.777
Bind_2220
PFAM: UspA domain protein; KEGG: nha:Nham_1935 UspA.
 
    0.730
Bind_1955
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.667
Bind_2203
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_4377 magnesium-translocating P-type ATPase.
 
    0.650
Bind_2141
KEGG: rpc:RPC_2461 ATPase, E1-E2 type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: Haloacid dehalogenase domain protein hydrolase; cation transporting ATPase domain protein; E1-E2 ATPase-associated domain protein.
 
    0.637
Bind_2222
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rpb:RPB_3686 cytochrome c biogenesis protein, transmembrane region.
       0.615
Bind_0283
Carboxymethylenebutenolidase; PFAM: dienelactone hydrolase; KEGG: bbt:BBta_7870 putative carboxymethylenebutenolidase.
  
  
 0.572
Bind_0848
KEGG: bha:BH0727 hypothetical protein.
  
  
 0.572
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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