STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2345PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bbt:BBta_5550 putative thioredoxin reductase, FAD/NAD(P)-binding. (344 aa)    
Predicted Functional Partners:
Bind_0056
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_1092 thioredoxin reductase.
  
  
 
0.905
Bind_0101
TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: bra:BRADO5444 cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.903
Bind_1232
TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: mag:amb1849 probable cysteine desulfurase 1; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.903
Bind_2430
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bcs:BCAN_B0712 thioredoxin peroxidase 2.
  
 
 0.752
Bind_2110
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mes:Meso_3582 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.749
Bind_2176
TIGRFAM: thioredoxin; PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.749
Bind_2346
PFAM: ferredoxin; KEGG: rpa:RPA3956 ferredoxin.
 
 
 
 0.748
Bind_2792
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: xau:Xaut_1982 thioredoxin.
  
 
 0.733
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.639
Bind_1155
PFAM: hydrogenase-1 expression HyaE; KEGG: azc:AZC_0603 hydrogenase expression/formation protein.
  
 
 0.620
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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