STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2373KEGG: nwi:Nwi_0593 hypothetical protein. (137 aa)    
Predicted Functional Partners:
Bind_1635
KEGG: mex:Mext_4416 hypothetical protein.
  
     0.731
Bind_0513
PFAM: protein of unknown function DUF1150; KEGG: xau:Xaut_2033 protein of unknown function DUF1150.
  
     0.723
Bind_1070
KEGG: rpd:RPD_0792 hypothetical protein.
  
     0.682
Bind_3505
KEGG: mex:Mext_0674 conserved hypothetical protein; putative deoxyribonuclease.
  
     0.681
Bind_1173
KEGG: mex:Mext_4307 hypothetical protein.
  
     0.680
Bind_1816
KEGG: mex:Mext_2318 hypothetical protein.
  
     0.617
Bind_2171
KEGG: mlo:mll5084 hypothetical protein.
  
     0.616
Bind_3233
PFAM: protein of unknown function DUF1036; KEGG: azc:AZC_0444 hypothetical protein.
  
     0.607
Bind_2033
Multi-sensor signal transduction histidine kinase; KEGG: azc:AZC_3122 PAS protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
     0.603
Bind_0731
PFAM: Invasion associated locus B family protein; KEGG: xau:Xaut_4649 invasion associated locus B family protein.
  
     0.574
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.