STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bind_2437PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpe:RPE_3194 binding-protein-dependent transport systems inner membrane component. (278 aa)    
Predicted Functional Partners:
ssuB
ABC transporter related; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.996
Bind_2438
KEGG: rpe:RPE_3192 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3.
 
 
 0.993
Bind_0677
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_3458 ABC transporter related.
 
 0.958
Bind_0550
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsq:Rsph17025_0748 ABC transporter related.
 
 0.954
ssuD
Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 0.919
Bind_0171
KEGG: ppg:PputGB1_1966 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3.
 
  
 0.848
Bind_0524
KEGG: pfl:PFL_1382 ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family, putative.
 
  
 0.848
Bind_0526
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: bam:Bamb_3674 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein.
 
  
 0.848
Bind_0904
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B0887 ABC-type transporter, periplasmic component: TauT family.
 
  
 0.848
Bind_2032
KEGG: bch:Bcen2424_4026 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein.
 
  
 0.848
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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