Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2522KEGG: pol:Bpro_2501 hypothetical protein. (189 aa)    
Predicted Functional Partners:
Bind_2521
PFAM: extracellular solute-binding protein family 1; KEGG: sun:SUN_0958 iron (III) ABC transporter, substrate-binding protein.
 
     0.634
Bind_2520
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sun:SUN_0959 iron (III) ABC transporter, permease.
       0.570
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: smd:Smed_0109 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.553
Bind_2519
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sun:SUN_0960 iron (III) ABC transporter, ATP-binding protein.
       0.548
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  
 0.460
Bind_2063
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: mex:Mext_0827 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
     
 0.427
Bind_3266
KEGG: gsu:GSU2811 cytochrome c Hsc.
  
     0.425
Bind_2523
TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: sme:SMc00808 putative chromate transport protein.
       0.411
Bind_2528
PFAM: protein of unknown function LppY and LpqO; KEGG: aba:Acid345_3442 protein of unknown function LppY and LpqO.
 
     0.406
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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