Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2597PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1282 methyltransferase type 11. (236 aa)    
Predicted Functional Partners:
Bind_2596
KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein.
 
     0.826
Bind_2598
KEGG: bur:Bcep18194_A5701 hypothetical protein.
       0.689
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.523
Bind_1384
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein.
  
     0.451
Bind_2600
KEGG: xau:Xaut_1283 tetratricopeptide TPR_2 repeat protein.
 
     0.448
Bind_2280
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: xau:Xaut_2101 activator of HSP90 ATPase 1 family protein.
  
     0.444
Bind_2595
KEGG: mex:Mext_2011 hypothetical protein.
       0.409
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
  
 0.401
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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