Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2624PFAM: Luciferase-like monooxygenase; KEGG: swi:Swit_4260 luciferase family protein. (386 aa)    
Predicted Functional Partners:
Bind_2625
PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein.
 
 
 0.855
Bind_1705
PFAM: flavin reductase domain protein FMN-binding; KEGG: bte:BTH_II2298 flavin reductase domain protein.
 
 
 0.670
Bind_2623
PFAM: ThiJ/PfpI domain protein; KEGG: vvy:VV0154 hypothetical protein.
       0.648
Bind_2622
PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: mag:amb4454 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase.
       0.508
Bind_0846
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; aminotransferase class-III; phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: mes:Meso_2580 amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.446
Bind_1853
PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: smd:Smed_5663 acyl-CoA dehydrogenase type 2 domain.
  
     0.441
Bind_2053
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_2915 hypothetical protein.
  
     0.422
Bind_2054
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 domain.
  
     0.418
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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