Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Bind_2723KEGG: xau:Xaut_3172 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Bind_2726
PFAM: conserved hypothetical protein; KEGG: ngo:NGO0507 hypothetical protein, putative phage associated protein.
 
 
   0.937
Bind_2727
KEGG: ngo:NGO0506 hypothetical protein, putative phage associated protein.
 
 
   0.925
Bind_2724
KEGG: ngo:NGO0510 hypothetical protein, putative phage associated protein.
 
  
 0.902
Bind_2725
KEGG: ngo:NGO0508 hypothetical protein, putative phage associated protein.
 
  
 0.888
Bind_2728
KEGG: rsq:Rsph17025_3714 hypothetical protein.
 
 
   0.865
Bind_0806
PFAM: lipopolysaccharide biosynthesis protein; KEGG: azc:AZC_2186 putative ATPase.
  
     0.750
Bind_0634
KEGG: ngo:NGO0496 hypothetical protein, putative phage associated protein.
   
 
 0.645
Bind_2759
PFAM: glycoside hydrolase family 5; KEGG: amr:AM1_1890 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
   0.603
Bind_0633
PFAM: protein of unknown function DUF264; KEGG: bvi:Bcep1808_1170 protein of unknown function DUF264.
 
   
 0.571
Bind_0196
KEGG: bxe:Bxe_B2118 hypothetical protein.
  
     0.562
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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