STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (511 aa)    
Predicted Functional Partners:
Bind_2822
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: smd:Smed_4266 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.996
Bind_2771
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_2900 putative rhizopine-binding protein precursor.
 
 0.968
Bind_2824
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor.
 
 
 0.941
Bind_2489
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH02642 rhizopine ABC transporter, substrate-binding protein.
 
 
 0.850
Bind_2862
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: pin:Ping_2807 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
 0.826
Bind_2837
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein.
 
 
 0.810
Bind_2340
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bte:BTH_II0209 ribose ABC transporter, periplasmic ribose-binding protein.
 
 
 0.789
Bind_3071
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bra:BRADO1392 ABC transporter; periplasmic subunit, putative sugar-binding protein.
 
 
 0.788
Bind_2861
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bja:bll5782 ABC transporter sugar-binding protein.
 
 
 0.786
Bind_3072
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bra:BRADO1819 putative L-arabinose transport system permease protein AraH.
  
 0.627
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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