Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2825PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsh:Rsph17029_2906 oxidoreductase domain protein. (391 aa)    
Predicted Functional Partners:
Bind_2826
PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: bra:BRADO0446 conserved hypothetical protein; putative xylose isomerase-like.
 
  
 0.955
Bind_2827
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2330 oxidoreductase domain protein.
 
    
0.832
Bind_2828
Inositol 2-dehydrogenase; PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: acr:Acry_2329 inositol 2-dehydrogenase.
 
     0.762
Bind_2835
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: acr:Acry_2325 xylose isomerase domain protein TIM barrel.
 
  
 0.538
Bind_2834
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: ppr:PBPRB0462 hypothetical acetolactate synthase, IolD.
 
  
 0.520
Bind_2824
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20712 putative rhizopine uptake ABC transporter periplasmic solute-binding protein precursor.
  
    0.495
Bind_2832
PFAM: protein of unknown function DUF81; KEGG: xau:Xaut_0652 protein of unknown function DUF81.
 
     0.432
Bind_2766
PFAM: regulatory protein LacI; KEGG: rle:pRL110623 putative transcriptional regulator.
 
    0.429
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.424
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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