Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bind_2842TIGRFAM: conserved hypothetical membrane protein; KEGG: mex:Mext_1457 hypothetical protein. (939 aa)    
Predicted Functional Partners:
Bind_2843
KEGG: mex:Mext_1458 protein of unknown function DUF58.
 
    0.960
Bind_2844
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: azc:AZC_3509 putative methanol dehydrogenase regulator.
 
     0.932
Bind_3475
KEGG: mex:Mext_1456 hypothetical protein.
 
     0.827
Bind_0051
KEGG: mex:Mext_1537 hypothetical protein.
  
    0.777
Bind_2845
PFAM: protein of unknown function DUF1285; KEGG: bja:blr2466 hypothetical protein.
 
     0.699
Bind_1061
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: azc:AZC_0013 putative transcriptional regulator.
  
     0.680
Bind_0086
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:bll7547 hypothetical protein.
  
     0.666
Bind_1656
PFAM: protein of unknown function DUF1491; KEGG: rpe:RPE_1874 protein of unknown function DUF1491.
  
     0.638
Bind_1791
PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849.
  
     0.581
Bind_2846
PFAM: Polynucleotide adenylyltransferase region; KEGG: azc:AZC_3505 putative poly(A) polymerase.
 
     0.559
Your Current Organism:
Beijerinckia indica
NCBI taxonomy Id: 395963
Other names: B. indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica ATCC 9039, Beijerinckia indica subsp. indica str. ATCC 9039, Beijerinckia indica subsp. indica strain ATCC 9039
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